Protein–RNA interactions for Protein: Q9NZZ3

CHMP5, Charged multivesicular body protein 5, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5Q9NZZ3 AL513523.2-202ENST00000427283 2040 ntBASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 AC022188.1-201ENST00000620960 1664 ntBASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 AC093525.9-201ENST00000624961 1746 ntBASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 KRT18P65-201ENST00000439811 1286 ntBASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 SEC1P-202ENST00000473944 940 ntBASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 AC079328.2-201ENST00000561241 3354 ntBASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CHMP5Q9NZZ3 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 AC113404.2-201ENST00000507884 177 ntBASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 AC006058.3-201ENST00000606217 1069 ntBASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CHMP5Q9NZZ3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 SLC25A1P2-201ENST00000430693 912 ntBASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 RPPH1-201ENST00000516869 333 ntBASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CHMP5Q9NZZ3 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CHMP5Q9NZZ3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms