Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRIM2Q9C040 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TRIM2Q9C040 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TRIM2Q9C040 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
TRIM2Q9C040 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 AC016396.2-201ENST00000562575 1417 ntBASIC16.14■□□□□ 0.17
TRIM2Q9C040 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TRIM2Q9C040 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TRIM2Q9C040 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 COX5BP2-201ENST00000392354 334 ntBASIC16.13■□□□□ 0.17
TRIM2Q9C040 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 TSPY22P-201ENST00000427496 604 ntBASIC16.13■□□□□ 0.17
TRIM2Q9C040 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 AC002558.1-201ENST00000488906 803 ntBASIC16.13■□□□□ 0.17
TRIM2Q9C040 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.13■□□□□ 0.17
TRIM2Q9C040 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRIM2Q9C040 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms