Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 CRYGEP-201ENST00000412192 528 ntBASIC17.35■□□□□ 0.37
HDAC8Q9BY41 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 VN2R19P-201ENST00000442399 1052 ntBASIC17.35■□□□□ 0.37
HDAC8Q9BY41 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 AC004790.2-201ENST00000623588 572 ntBASIC17.35■□□□□ 0.37
HDAC8Q9BY41 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
HDAC8Q9BY41 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 LYSMD4-203ENST00000378904 2122 ntBASIC17.34■□□□□ 0.37
HDAC8Q9BY41 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 AC092865.5-201ENST00000545435 363 ntBASIC17.34■□□□□ 0.37
HDAC8Q9BY41 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 MIR4751-201ENST00000578027 74 ntBASIC17.34■□□□□ 0.37
HDAC8Q9BY41 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 AC008764.6-201ENST00000595909 2069 ntBASIC17.34■□□□□ 0.37
HDAC8Q9BY41 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
HDAC8Q9BY41 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 NOC2LP1-202ENST00000452600 2235 ntBASIC17.33■□□□□ 0.37
HDAC8Q9BY41 AL355312.1-201ENST00000407115 2176 ntBASIC17.33■□□□□ 0.37
HDAC8Q9BY41 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
HDAC8Q9BY41 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 MRPL20P1-201ENST00000400819 433 ntBASIC17.33■□□□□ 0.36
HDAC8Q9BY41 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.33■□□□□ 0.36
HDAC8Q9BY41 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 AC010654.1-201ENST00000615722 808 ntBASIC17.33■□□□□ 0.36
HDAC8Q9BY41 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
HDAC8Q9BY41 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms