Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 AC111152.3-201ENST00000569699 673 ntBASIC14.69□□□□□ -0.06
CCL13Q99616 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.69□□□□□ -0.06
CCL13Q99616 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 AC019129.2-201ENST00000609837 1235 ntBASIC14.69□□□□□ -0.06
CCL13Q99616 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC14.69□□□□□ -0.06
CCL13Q99616 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL13Q99616 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCL13Q99616 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL13Q99616 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.69□□□□□ -0.06
CCL13Q99616 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCL13Q99616 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CCL13Q99616 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 PCDHB18P-201ENST00000524813 2368 ntBASIC14.69□□□□□ -0.06
CCL13Q99616 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCL13Q99616 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCL13Q99616 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 AL049757.1-201ENST00000616842 1596 ntBASIC14.68□□□□□ -0.06
CCL13Q99616 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.68□□□□□ -0.06
CCL13Q99616 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL13Q99616 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL13Q99616 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL13Q99616 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.68□□□□□ -0.06
CCL13Q99616 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.68□□□□□ -0.06
CCL13Q99616 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL13Q99616 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCL13Q99616 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL13Q99616 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.68□□□□□ -0.06
CCL13Q99616 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.68□□□□□ -0.06
CCL13Q99616 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.68□□□□□ -0.06
CCL13Q99616 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CCL13Q99616 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCL13Q99616 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC14.68□□□□□ -0.06
CCL13Q99616 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.68□□□□□ -0.06
CCL13Q99616 IFNL4P1-201ENST00000607083 540 ntBASIC14.68□□□□□ -0.06
CCL13Q99616 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CCL13Q99616 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCL13Q99616 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL13Q99616 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC14.68□□□□□ -0.06
CCL13Q99616 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
CCL13Q99616 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CCL13Q99616 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CCL13Q99616 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL13Q99616 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCL13Q99616 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL13Q99616 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 AC005104.2-201ENST00000427818 678 ntBASIC14.67□□□□□ -0.06
CCL13Q99616 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC14.67□□□□□ -0.06
CCL13Q99616 AC002558.1-201ENST00000488906 803 ntBASIC14.67□□□□□ -0.06
CCL13Q99616 UNC93B7-201ENST00000509439 705 ntBASIC14.67□□□□□ -0.06
CCL13Q99616 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL13Q99616 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCL13Q99616 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.67□□□□□ -0.06
CCL13Q99616 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CCL13Q99616 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CCL13Q99616 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CCL13Q99616 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms