Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAX2Q96IS3 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.69□□□□□ -0.22
RAX2Q96IS3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
RAX2Q96IS3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAX2Q96IS3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RAX2Q96IS3 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
RAX2Q96IS3 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAX2Q96IS3 AC090164.3-201ENST00000610780 2143 ntBASIC13.69□□□□□ -0.22
RAX2Q96IS3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RAX2Q96IS3 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAX2Q96IS3 AL139384.1-201ENST00000612143 3047 ntBASIC13.69□□□□□ -0.22
RAX2Q96IS3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RAX2Q96IS3 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RAX2Q96IS3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AL031284.1-201ENST00000419297 478 ntBASIC13.68□□□□□ -0.22
RAX2Q96IS3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AC073648.2-201ENST00000510116 352 ntBASIC13.68□□□□□ -0.22
RAX2Q96IS3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 AC135776.1-201ENST00000319817 2481 ntBASIC13.68□□□□□ -0.22
RAX2Q96IS3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RAX2Q96IS3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC13.68□□□□□ -0.22
RAX2Q96IS3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 AL590627.1-203ENST00000421194 1026 ntBASIC13.67□□□□□ -0.22
RAX2Q96IS3 AC096633.1-201ENST00000422446 749 ntBASIC13.67□□□□□ -0.22
RAX2Q96IS3 RNPS1P1-201ENST00000507437 918 ntBASIC13.67□□□□□ -0.22
RAX2Q96IS3 RNA5SP419-201ENST00000515908 135 ntBASIC13.67□□□□□ -0.22
RAX2Q96IS3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 AC120114.3-201ENST00000611923 658 ntBASIC13.67□□□□□ -0.22
RAX2Q96IS3 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.67□□□□□ -0.22
RAX2Q96IS3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC13.67□□□□□ -0.22
RAX2Q96IS3 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RAX2Q96IS3 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms