Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 AC019129.2-201ENST00000609837 1235 ntBASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 AL139327.4-201ENST00000612362 153 ntBASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SMARCC2Q8TAQ2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SMARCC2Q8TAQ2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC20.52■□□□□ 0.87
SMARCC2Q8TAQ2 AC016396.2-201ENST00000562575 1417 ntBASIC20.52■□□□□ 0.87
SMARCC2Q8TAQ2 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SMARCC2Q8TAQ2 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 TPM4P1-201ENST00000436100 807 ntBASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 KRT16P4-201ENST00000453883 522 ntBASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 AC022211.2-201ENST00000585075 2527 ntBASIC20.5■□□□□ 0.87
SMARCC2Q8TAQ2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 AC009533.2-201ENST00000543664 586 ntBASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 RN7SL510P-201ENST00000581311 263 ntBASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SMARCC2Q8TAQ2 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 PCDHA12-202ENST00000613593 2588 ntBASIC20.48■□□□□ 0.87
SMARCC2Q8TAQ2 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms