Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NPAS4Q8IUM7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 TNXA-203ENST00000507684 2038 ntBASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 AC004461.1-201ENST00000412461 403 ntBASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 AL121761.2-201ENST00000598007 1648 ntBASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 AC098818.2-201ENST00000564925 2320 ntBASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NPAS4Q8IUM7 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 AC006116.8-202ENST00000587620 1550 ntBASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 AC112191.1-201ENST00000523689 701 ntBASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 AC004449.1-201ENST00000564240 433 ntBASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 AC011467.4-201ENST00000594891 528 ntBASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 AC090164.3-201ENST00000610780 2143 ntBASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
NPAS4Q8IUM7 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.64■□□□□ 0.58
NPAS4Q8IUM7 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
NPAS4Q8IUM7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.64■□□□□ 0.58
NPAS4Q8IUM7 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 FAM8A3P-201ENST00000427218 844 ntBASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 AC092364.2-202ENST00000597012 1073 ntBASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 AC022145.2-201ENST00000598203 171 ntBASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NPAS4Q8IUM7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms