Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.66■□□□□ 0.74
TPM4P67936 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.66■□□□□ 0.74
TPM4P67936 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.66■□□□□ 0.74
TPM4P67936 AL512604.3-201ENST00000569583 964 ntBASIC19.66■□□□□ 0.74
TPM4P67936 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.66■□□□□ 0.74
TPM4P67936 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.66■□□□□ 0.74
TPM4P67936 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC19.66■□□□□ 0.74
TPM4P67936 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TPM4P67936 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.66■□□□□ 0.74
TPM4P67936 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
TPM4P67936 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.66■□□□□ 0.74
TPM4P67936 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM4P67936 OS9-205ENST00000413095 1660 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM4P67936 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
TPM4P67936 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 AC008894.3-201ENST00000624324 3103 ntBASIC19.65■□□□□ 0.74
TPM4P67936 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM4P67936 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.65■□□□□ 0.74
TPM4P67936 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TPM4P67936 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM4P67936 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM4P67936 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.65■□□□□ 0.74
TPM4P67936 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM4P67936 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM4P67936 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM4P67936 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.65■□□□□ 0.74
TPM4P67936 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM4P67936 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TPM4P67936 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.65■□□□□ 0.74
TPM4P67936 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
TPM4P67936 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TPM4P67936 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TPM4P67936 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.74
TPM4P67936 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
TPM4P67936 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TPM4P67936 AL391005.1-201ENST00000623953 2435 ntBASIC19.64■□□□□ 0.74
TPM4P67936 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TPM4P67936 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
TPM4P67936 AC009947.2-201ENST00000444014 672 ntBASIC19.64■□□□□ 0.73
TPM4P67936 FITM1-202ENST00000559294 800 ntBASIC19.64■□□□□ 0.73
TPM4P67936 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.64■□□□□ 0.73
TPM4P67936 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM4P67936 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM4P67936 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.64■□□□□ 0.73
TPM4P67936 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM4P67936 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TPM4P67936 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.64■□□□□ 0.73
TPM4P67936 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TPM4P67936 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.64■□□□□ 0.73
TPM4P67936 LYSMD4-203ENST00000378904 2122 ntBASIC19.64■□□□□ 0.73
TPM4P67936 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TPM4P67936 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC19.64■□□□□ 0.73
TPM4P67936 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TPM4P67936 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM4P67936 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM4P67936 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TPM4P67936 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TPM4P67936 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms