Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP2B4P23634 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ATP2B4P23634 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP2B4P23634 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATP2B4P23634 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
ATP2B4P23634 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP2B4P23634 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP2B4P23634 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 SLC25A6P2-201ENST00000497974 877 ntBASIC21.11■□□□□ 0.97
ATP2B4P23634 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC21.11■□□□□ 0.97
ATP2B4P23634 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP2B4P23634 AC004835.2-201ENST00000603762 682 ntBASIC21.11■□□□□ 0.97
ATP2B4P23634 ORC5-208ENST00000626700 344 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP2B4P23634 AC105339.1-204ENST00000636249 355 ntBASIC21.11■□□□□ 0.97
ATP2B4P23634 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP2B4P23634 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2B4P23634 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP2B4P23634 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATP2B4P23634 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP2B4P23634 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 TSEN15P1-201ENST00000423257 515 ntBASIC21.1■□□□□ 0.97
ATP2B4P23634 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.1■□□□□ 0.97
ATP2B4P23634 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP2B4P23634 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.1■□□□□ 0.97
ATP2B4P23634 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
ATP2B4P23634 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
ATP2B4P23634 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ATP2B4P23634 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2B4P23634 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP2B4P23634 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2B4P23634 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP2B4P23634 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP2B4P23634 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2B4P23634 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2B4P23634 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2B4P23634 AC087163.2-201ENST00000457299 853 ntBASIC21.09■□□□□ 0.97
ATP2B4P23634 RNF34-208ENST00000555076 593 ntTSL 3 BASIC21.09■□□□□ 0.97
ATP2B4P23634 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.09■□□□□ 0.97
ATP2B4P23634 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP2B4P23634 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 AC006116.8-202ENST00000587620 1550 ntBASIC21.09■□□□□ 0.97
ATP2B4P23634 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.09■□□□□ 0.97
ATP2B4P23634 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATP2B4P23634 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 AC129492.6-201ENST00000611383 1305 ntBASIC21.08■□□□□ 0.97
ATP2B4P23634 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP2B4P23634 AL121761.2-201ENST00000598007 1648 ntBASIC21.08■□□□□ 0.97
ATP2B4P23634 AC092919.2-201ENST00000623631 1645 ntBASIC21.08■□□□□ 0.97
ATP2B4P23634 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP2B4P23634 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.08■□□□□ 0.97
ATP2B4P23634 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.08■□□□□ 0.97
ATP2B4P23634 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 AL139400.1-201ENST00000366220 510 ntBASIC21.08■□□□□ 0.97
ATP2B4P23634 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
ATP2B4P23634 AC004461.1-201ENST00000412461 403 ntBASIC21.08■□□□□ 0.97
ATP2B4P23634 FALEC-201ENST00000416894 566 ntTSL 3 BASIC21.08■□□□□ 0.97
ATP2B4P23634 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.08■□□□□ 0.97
ATP2B4P23634 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATP2B4P23634 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.08■□□□□ 0.97
ATP2B4P23634 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC21.08■□□□□ 0.97
ATP2B4P23634 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.08■□□□□ 0.96
ATP2B4P23634 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms