Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.51■□□□□ 0.07
MSR1P21757 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.51■□□□□ 0.07
MSR1P21757 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
MSR1P21757 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
MSR1P21757 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC15.51■□□□□ 0.07
MSR1P21757 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.51■□□□□ 0.07
MSR1P21757 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.51■□□□□ 0.07
MSR1P21757 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.51■□□□□ 0.07
MSR1P21757 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
MSR1P21757 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
MSR1P21757 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
MSR1P21757 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.51■□□□□ 0.07
MSR1P21757 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.51■□□□□ 0.07
MSR1P21757 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
MSR1P21757 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
MSR1P21757 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC15.5■□□□□ 0.07
MSR1P21757 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.5■□□□□ 0.07
MSR1P21757 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.5■□□□□ 0.07
MSR1P21757 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
MSR1P21757 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC15.5■□□□□ 0.07
MSR1P21757 FAM220CP-201ENST00000395253 831 ntBASIC15.5■□□□□ 0.07
MSR1P21757 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.5■□□□□ 0.07
MSR1P21757 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.5■□□□□ 0.07
MSR1P21757 AC122714.2-201ENST00000502787 707 ntBASIC15.5■□□□□ 0.07
MSR1P21757 KRT18P35-201ENST00000510488 1269 ntBASIC15.5■□□□□ 0.07
MSR1P21757 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
MSR1P21757 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC15.5■□□□□ 0.07
MSR1P21757 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC15.5■□□□□ 0.07
MSR1P21757 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.5■□□□□ 0.07
MSR1P21757 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.5■□□□□ 0.07
MSR1P21757 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
MSR1P21757 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.49■□□□□ 0.07
MSR1P21757 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.49■□□□□ 0.07
MSR1P21757 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.49■□□□□ 0.07
MSR1P21757 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC15.49■□□□□ 0.07
MSR1P21757 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.49■□□□□ 0.07
MSR1P21757 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC15.49■□□□□ 0.07
MSR1P21757 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MSR1P21757 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 AL645608.8-201ENST00000606034 2086 ntBASIC15.49■□□□□ 0.07
MSR1P21757 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
MSR1P21757 MYCLP1-201ENST00000372451 1075 ntBASIC15.49■□□□□ 0.07
MSR1P21757 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.49■□□□□ 0.07
MSR1P21757 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MSR1P21757 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.49■□□□□ 0.07
MSR1P21757 DRAXINP1-201ENST00000437611 948 ntBASIC15.49■□□□□ 0.07
MSR1P21757 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MSR1P21757 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.49■□□□□ 0.07
MSR1P21757 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.49■□□□□ 0.07
MSR1P21757 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.49■□□□□ 0.07
MSR1P21757 IGHV3-52-201ENST00000519770 353 ntBASIC15.49■□□□□ 0.07
MSR1P21757 AC009533.2-201ENST00000543664 586 ntBASIC15.49■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms