Protein–RNA interactions for Protein: P0CJ79

ZNF888, Zinc finger protein 888, humanhuman

Predicted RBP Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF888P0CJ79 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ZNF888P0CJ79 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.64■□□□□ 0.26
ZNF888P0CJ79 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF888P0CJ79 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ZNF888P0CJ79 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 SAPCD2P3-201ENST00000455031 850 ntBASIC16.64■□□□□ 0.25
ZNF888P0CJ79 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 STK19B-204ENST00000512515 211 ntBASIC16.64■□□□□ 0.25
ZNF888P0CJ79 AC106795.1-205ENST00000512851 1056 ntBASIC16.64■□□□□ 0.25
ZNF888P0CJ79 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ZNF888P0CJ79 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PKD1P1-201ENST00000458669 6805 ntBASIC16.63■□□□□ 0.25
ZNF888P0CJ79 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 AC003669.1-201ENST00000334569 611 ntBASIC16.63■□□□□ 0.25
ZNF888P0CJ79 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 RBM17P3-201ENST00000417687 1192 ntBASIC16.63■□□□□ 0.25
ZNF888P0CJ79 EMBP1-201ENST00000458200 901 ntBASIC16.63■□□□□ 0.25
ZNF888P0CJ79 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 MTDHP3-201ENST00000594186 672 ntBASIC16.63■□□□□ 0.25
ZNF888P0CJ79 AC008608.2-201ENST00000606089 416 ntBASIC16.63■□□□□ 0.25
ZNF888P0CJ79 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ZNF888P0CJ79 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF888P0CJ79 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms