Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.69■□□□□ 0.74
HOXC6P09630 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
HOXC6P09630 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
HOXC6P09630 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
HOXC6P09630 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC6P09630 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC6P09630 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC6P09630 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC6P09630 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HOXC6P09630 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXC6P09630 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC6P09630 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
HOXC6P09630 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC6P09630 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC6P09630 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
HOXC6P09630 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
HOXC6P09630 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
HOXC6P09630 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC6P09630 ADH5P3-201ENST00000433842 1137 ntBASIC19.68■□□□□ 0.74
HOXC6P09630 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXC6P09630 CFL1-212ENST00000531413 636 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXC6P09630 AC025678.2-201ENST00000562061 970 ntBASIC19.68■□□□□ 0.74
HOXC6P09630 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXC6P09630 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.68■□□□□ 0.74
HOXC6P09630 ACTL9-202ENST00000612068 1252 ntBASIC19.68■□□□□ 0.74
HOXC6P09630 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC6P09630 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC6P09630 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC6P09630 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
HOXC6P09630 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.68■□□□□ 0.74
HOXC6P09630 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.68■□□□□ 0.74
HOXC6P09630 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXC6P09630 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC6P09630 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC6P09630 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXC6P09630 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
HOXC6P09630 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC6P09630 AC023141.5-201ENST00000458585 616 ntBASIC19.67■□□□□ 0.74
HOXC6P09630 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXC6P09630 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC19.67■□□□□ 0.74
HOXC6P09630 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
HOXC6P09630 DAD1-205ENST00000543337 501 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXC6P09630 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.67■□□□□ 0.74
HOXC6P09630 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.67■□□□□ 0.74
HOXC6P09630 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.67■□□□□ 0.74
HOXC6P09630 AC093512.1-201ENST00000617969 520 ntBASIC19.67■□□□□ 0.74
HOXC6P09630 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC19.67■□□□□ 0.74
HOXC6P09630 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.67■□□□□ 0.74
HOXC6P09630 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
HOXC6P09630 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.67■□□□□ 0.74
HOXC6P09630 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
HOXC6P09630 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC6P09630 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXC6P09630 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC6P09630 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.66■□□□□ 0.74
HOXC6P09630 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXC6P09630 PAWRP1-201ENST00000451083 565 ntBASIC19.66■□□□□ 0.74
HOXC6P09630 AC109322.1-201ENST00000524499 1264 ntBASIC19.66■□□□□ 0.74
HOXC6P09630 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 AC015911.4-201ENST00000588022 1070 ntBASIC19.66■□□□□ 0.74
HOXC6P09630 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXC6P09630 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
HOXC6P09630 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.66■□□□□ 0.74
HOXC6P09630 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.66■□□□□ 0.74
HOXC6P09630 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC19.66■□□□□ 0.74
HOXC6P09630 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 AC135776.1-201ENST00000319817 2481 ntBASIC19.66■□□□□ 0.74
HOXC6P09630 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HOXC6P09630 AC006116.8-202ENST00000587620 1550 ntBASIC19.66■□□□□ 0.74
HOXC6P09630 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HOXC6P09630 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 163.9 ms