Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SSSCA1O60232 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC14.33□□□□□ -0.12
SSSCA1O60232 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.33□□□□□ -0.12
SSSCA1O60232 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SSSCA1O60232 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SSSCA1O60232 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SSSCA1O60232 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.33□□□□□ -0.12
SSSCA1O60232 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.33□□□□□ -0.12
SSSCA1O60232 ESRRAP1-201ENST00000400596 1257 ntBASIC14.33□□□□□ -0.12
SSSCA1O60232 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.33□□□□□ -0.12
SSSCA1O60232 APTR-205ENST00000447009 902 ntTSL 2 BASIC14.33□□□□□ -0.12
SSSCA1O60232 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC14.33□□□□□ -0.12
SSSCA1O60232 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC14.33□□□□□ -0.12
SSSCA1O60232 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SSSCA1O60232 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.33□□□□□ -0.12
SSSCA1O60232 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SSSCA1O60232 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SSSCA1O60232 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC14.32□□□□□ -0.12
SSSCA1O60232 LINC00167-201ENST00000530583 1419 ntBASIC14.32□□□□□ -0.12
SSSCA1O60232 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SSSCA1O60232 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.32□□□□□ -0.12
SSSCA1O60232 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.32□□□□□ -0.12
SSSCA1O60232 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC14.32□□□□□ -0.12
SSSCA1O60232 DDX43P3-201ENST00000441064 443 ntBASIC14.32□□□□□ -0.12
SSSCA1O60232 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.32□□□□□ -0.12
SSSCA1O60232 C1QBPP2-201ENST00000528754 825 ntBASIC14.32□□□□□ -0.12
SSSCA1O60232 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC14.32□□□□□ -0.12
SSSCA1O60232 AC073648.6-201ENST00000641589 218 ntBASIC14.32□□□□□ -0.12
SSSCA1O60232 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SSSCA1O60232 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
SSSCA1O60232 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.32□□□□□ -0.12
SSSCA1O60232 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SSSCA1O60232 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSSCA1O60232 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SSSCA1O60232 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
SSSCA1O60232 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSSCA1O60232 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSSCA1O60232 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSSCA1O60232 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC14.31□□□□□ -0.12
SSSCA1O60232 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSSCA1O60232 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SSSCA1O60232 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC14.31□□□□□ -0.12
SSSCA1O60232 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SSSCA1O60232 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SSSCA1O60232 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SSSCA1O60232 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms