Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12.87□□□□□ -0.35
SMKR1H3BMG3 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 GCK-209ENST00000616242 2260 ntTSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 AC069152.1-201ENST00000438030 544 ntBASIC12.86□□□□□ -0.35
SMKR1H3BMG3 MAP2K4P1-201ENST00000438453 1195 ntBASIC12.86□□□□□ -0.35
SMKR1H3BMG3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 AC026271.3-201ENST00000571884 352 ntBASIC12.86□□□□□ -0.35
SMKR1H3BMG3 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 MIR4674-201ENST00000582457 87 ntBASIC12.86□□□□□ -0.35
SMKR1H3BMG3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 AC133041.1-202ENST00000642053 222 ntBASIC12.86□□□□□ -0.35
SMKR1H3BMG3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 AC022898.2-201ENST00000616822 1312 ntBASIC12.86□□□□□ -0.35
SMKR1H3BMG3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.86□□□□□ -0.35
SMKR1H3BMG3 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 FRMD6-AS1-201ENST00000617151 2229 ntBASIC12.85□□□□□ -0.35
SMKR1H3BMG3 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 B3GAT3P1-201ENST00000471720 806 ntBASIC12.85□□□□□ -0.35
SMKR1H3BMG3 AP003097.1-201ENST00000530657 1135 ntBASIC12.85□□□□□ -0.35
SMKR1H3BMG3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 MIR6786-201ENST00000616843 113 ntBASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SMKR1H3BMG3 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms