Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 AL391807.1-203ENST00000604392 2365 ntBASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRBV6-7A0A0A0MS04 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 AL136038.4-201ENST00000603606 1261 ntBASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 AC079602.3-201ENST00000623931 403 ntBASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 BX276092.7-203ENST00000637198 1536 ntBASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 LINC02199-201ENST00000506655 2702 ntBASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRBV6-7A0A0A0MS04 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 AC016396.2-201ENST00000562575 1417 ntBASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 AC005104.2-201ENST00000427818 678 ntBASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 AC004263.2-201ENST00000617183 678 ntBASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC14.68□□□□□ -0.06
TRBV6-7A0A0A0MS04 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms