Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 COX11P1-201ENST00000489116 835 ntBASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 KRT18P41-201ENST00000518924 1277 ntBASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
AP4B1Q9Y6B7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
AP4B1Q9Y6B7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
AP4B1Q9Y6B7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
AP4B1Q9Y6B7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.89■□□□□ 0.29
AP4B1Q9Y6B7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 AC103702.1-201ENST00000548801 2630 ntBASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 AC009947.2-201ENST00000444014 672 ntBASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 AC140113.3-201ENST00000605663 199 ntBASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
AP4B1Q9Y6B7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms