Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 AC091076.1-201ENST00000610741 619 ntBASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MS4A4EQ96PG1 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 AC016396.2-201ENST00000562575 1417 ntBASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 TOB2P1-201ENST00000469761 992 ntBASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 AC111152.3-201ENST00000569699 673 ntBASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 AC109462.3-201ENST00000573934 613 ntBASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 AL445228.2-201ENST00000605589 952 ntBASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MS4A4EQ96PG1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 LINC00265-3P-201ENST00000447588 903 ntBASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 AC010331.1-201ENST00000611423 582 ntBASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
MS4A4EQ96PG1 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 ARMC10P1-201ENST00000313754 855 ntBASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MS4A4EQ96PG1 MINOS1P3-201ENST00000457048 203 ntBASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms