Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.13■□□□□ 0.49
IFT43Q96FT9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
IFT43Q96FT9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 AC100803.2-201ENST00000562459 1963 ntBASIC18.12■□□□□ 0.49
IFT43Q96FT9 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 TOB2P1-201ENST00000469761 992 ntBASIC18.12■□□□□ 0.49
IFT43Q96FT9 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 AP000867.3-201ENST00000524675 377 ntBASIC18.12■□□□□ 0.49
IFT43Q96FT9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
IFT43Q96FT9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
IFT43Q96FT9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 AC080080.1-201ENST00000625121 2420 ntBASIC18.11■□□□□ 0.49
IFT43Q96FT9 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 KRT17P6-201ENST00000453795 1220 ntBASIC18.11■□□□□ 0.49
IFT43Q96FT9 AC112698.1-201ENST00000510299 916 ntBASIC18.11■□□□□ 0.49
IFT43Q96FT9 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 LINC01711-201ENST00000598340 967 ntBASIC18.11■□□□□ 0.49
IFT43Q96FT9 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
IFT43Q96FT9 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
IFT43Q96FT9 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
IFT43Q96FT9 MTCL1P1-201ENST00000446207 792 ntBASIC18.1■□□□□ 0.49
IFT43Q96FT9 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.1■□□□□ 0.49
IFT43Q96FT9 AC068472.1-201ENST00000474589 881 ntBASIC18.1■□□□□ 0.49
IFT43Q96FT9 AC104819.1-201ENST00000504587 486 ntBASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms