Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.64■□□□□ 0.57
BRCC3P46736 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.64■□□□□ 0.57
BRCC3P46736 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
BRCC3P46736 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.64■□□□□ 0.57
BRCC3P46736 AC139530.3-201ENST00000620344 690 ntBASIC18.64■□□□□ 0.57
BRCC3P46736 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.64■□□□□ 0.57
BRCC3P46736 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
BRCC3P46736 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
BRCC3P46736 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
BRCC3P46736 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BRCC3P46736 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.64■□□□□ 0.57
BRCC3P46736 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.63■□□□□ 0.57
BRCC3P46736 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
BRCC3P46736 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
BRCC3P46736 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.63■□□□□ 0.57
BRCC3P46736 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.63■□□□□ 0.57
BRCC3P46736 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.63■□□□□ 0.57
BRCC3P46736 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.63■□□□□ 0.57
BRCC3P46736 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 LINC00982-205ENST00000420957 435 ntBASIC18.63■□□□□ 0.57
BRCC3P46736 SLC4A1APP2-201ENST00000424054 1259 ntBASIC18.63■□□□□ 0.57
BRCC3P46736 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.63■□□□□ 0.57
BRCC3P46736 RPS15P9-201ENST00000494093 319 ntBASIC18.63■□□□□ 0.57
BRCC3P46736 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.63■□□□□ 0.57
BRCC3P46736 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC18.63■□□□□ 0.57
BRCC3P46736 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.63■□□□□ 0.57
BRCC3P46736 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BRCC3P46736 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.63■□□□□ 0.57
BRCC3P46736 AMT-250ENST00000637682 1823 ntTSL 5 BASIC18.63■□□□□ 0.57
BRCC3P46736 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
BRCC3P46736 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
BRCC3P46736 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.62■□□□□ 0.57
BRCC3P46736 NEFHP1-201ENST00000412845 2629 ntBASIC18.62■□□□□ 0.57
BRCC3P46736 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.62■□□□□ 0.57
BRCC3P46736 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
BRCC3P46736 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.62■□□□□ 0.57
BRCC3P46736 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BRCC3P46736 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BRCC3P46736 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
BRCC3P46736 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.62■□□□□ 0.57
BRCC3P46736 AC108073.2-201ENST00000464002 357 ntBASIC18.62■□□□□ 0.57
BRCC3P46736 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.62■□□□□ 0.57
BRCC3P46736 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.62■□□□□ 0.57
BRCC3P46736 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.62■□□□□ 0.57
BRCC3P46736 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC18.62■□□□□ 0.57
BRCC3P46736 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.62■□□□□ 0.57
BRCC3P46736 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
BRCC3P46736 AC064836.3-201ENST00000607928 673 ntBASIC18.62■□□□□ 0.57
BRCC3P46736 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.62■□□□□ 0.57
BRCC3P46736 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.62■□□□□ 0.57
BRCC3P46736 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
BRCC3P46736 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
BRCC3P46736 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.62■□□□□ 0.57
BRCC3P46736 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.62■□□□□ 0.57
BRCC3P46736 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
BRCC3P46736 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
BRCC3P46736 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
BRCC3P46736 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.61■□□□□ 0.57
BRCC3P46736 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRCC3P46736 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
BRCC3P46736 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
BRCC3P46736 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRCC3P46736 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.61■□□□□ 0.57
BRCC3P46736 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRCC3P46736 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
BRCC3P46736 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRCC3P46736 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRCC3P46736 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
BRCC3P46736 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
BRCC3P46736 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms