Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.69■□□□□ 0.26
RORAP35398 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RORAP35398 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.69■□□□□ 0.26
RORAP35398 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RORAP35398 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RORAP35398 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 AL353593.2-201ENST00000602529 1483 ntBASIC16.68■□□□□ 0.26
RORAP35398 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 AC100803.2-201ENST00000562459 1963 ntBASIC16.68■□□□□ 0.26
RORAP35398 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.68■□□□□ 0.26
RORAP35398 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RORAP35398 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.68■□□□□ 0.26
RORAP35398 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.68■□□□□ 0.26
RORAP35398 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.68■□□□□ 0.26
RORAP35398 LAGE3P1-201ENST00000425356 484 ntBASIC16.68■□□□□ 0.26
RORAP35398 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.68■□□□□ 0.26
RORAP35398 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.68■□□□□ 0.26
RORAP35398 PRYP5-201ENST00000451909 266 ntBASIC16.68■□□□□ 0.26
RORAP35398 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.68■□□□□ 0.26
RORAP35398 KRT18P58-201ENST00000527480 1120 ntBASIC16.68■□□□□ 0.26
RORAP35398 AC145285.3-201ENST00000564603 959 ntBASIC16.68■□□□□ 0.26
RORAP35398 AC116407.2-201ENST00000613639 860 ntBASIC16.68■□□□□ 0.26
RORAP35398 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.68■□□□□ 0.26
RORAP35398 AC073592.5-201ENST00000624854 528 ntBASIC16.68■□□□□ 0.26
RORAP35398 KRT18P55-202ENST00000578578 1546 ntBASIC16.68■□□□□ 0.26
RORAP35398 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.68■□□□□ 0.26
RORAP35398 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RORAP35398 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.68■□□□□ 0.26
RORAP35398 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.68■□□□□ 0.26
RORAP35398 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.68■□□□□ 0.26
RORAP35398 AL049757.1-201ENST00000616842 1596 ntBASIC16.68■□□□□ 0.26
RORAP35398 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.67■□□□□ 0.26
RORAP35398 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RORAP35398 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 ZNF259P1-201ENST00000407656 1365 ntBASIC16.67■□□□□ 0.26
RORAP35398 SIRPAP1-201ENST00000448467 1770 ntBASIC16.67■□□□□ 0.26
RORAP35398 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.67■□□□□ 0.26
RORAP35398 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.67■□□□□ 0.26
RORAP35398 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RORAP35398 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RORAP35398 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 AC098831.1-202ENST00000438821 336 ntBASIC16.67■□□□□ 0.26
RORAP35398 DDX43P3-201ENST00000441064 443 ntBASIC16.67■□□□□ 0.26
RORAP35398 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.67■□□□□ 0.26
RORAP35398 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.67■□□□□ 0.26
RORAP35398 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RORAP35398 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.67■□□□□ 0.26
RORAP35398 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.67■□□□□ 0.26
RORAP35398 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.67■□□□□ 0.26
RORAP35398 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.67■□□□□ 0.26
RORAP35398 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.67■□□□□ 0.26
RORAP35398 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RORAP35398 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RORAP35398 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RORAP35398 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RORAP35398 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RORAP35398 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RORAP35398 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.66■□□□□ 0.26
RORAP35398 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RORAP35398 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RORAP35398 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RORAP35398 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RORAP35398 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RORAP35398 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.66■□□□□ 0.26
RORAP35398 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.66■□□□□ 0.26
RORAP35398 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms