Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MBD4O95243 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.93■□□□□ 0.94
MBD4O95243 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.93■□□□□ 0.94
MBD4O95243 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD4O95243 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
MBD4O95243 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 AC068880.1-201ENST00000507289 2297 ntBASIC20.92■□□□□ 0.94
MBD4O95243 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.92■□□□□ 0.94
MBD4O95243 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.92■□□□□ 0.94
MBD4O95243 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.92■□□□□ 0.94
MBD4O95243 CENPM-204ENST00000402420 688 ntTSL 5 BASIC20.92■□□□□ 0.94
MBD4O95243 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD4O95243 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.92■□□□□ 0.94
MBD4O95243 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC20.92■□□□□ 0.94
MBD4O95243 AC139887.3-201ENST00000568585 713 ntBASIC20.92■□□□□ 0.94
MBD4O95243 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.92■□□□□ 0.94
MBD4O95243 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.92■□□□□ 0.94
MBD4O95243 AC008735.5-201ENST00000623544 497 ntBASIC20.92■□□□□ 0.94
MBD4O95243 AC116407.3-201ENST00000623905 1129 ntBASIC20.92■□□□□ 0.94
MBD4O95243 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 IL9RP2-201ENST00000423948 1312 ntBASIC20.92■□□□□ 0.94
MBD4O95243 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
MBD4O95243 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.92■□□□□ 0.94
MBD4O95243 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
MBD4O95243 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MBD4O95243 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.91■□□□□ 0.94
MBD4O95243 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MBD4O95243 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
MBD4O95243 RPS2P28-201ENST00000314255 741 ntBASIC20.91■□□□□ 0.94
MBD4O95243 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MBD4O95243 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
MBD4O95243 AC133963.1-201ENST00000504166 1679 ntBASIC20.91■□□□□ 0.94
MBD4O95243 AC093909.1-201ENST00000504731 1122 ntBASIC20.91■□□□□ 0.94
MBD4O95243 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
MBD4O95243 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC20.91■□□□□ 0.94
MBD4O95243 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.91■□□□□ 0.94
MBD4O95243 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
MBD4O95243 AP002414.3-201ENST00000589352 1468 ntBASIC20.91■□□□□ 0.94
MBD4O95243 AC067852.2-201ENST00000590513 2313 ntBASIC20.91■□□□□ 0.94
MBD4O95243 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MBD4O95243 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.91■□□□□ 0.94
MBD4O95243 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MBD4O95243 AC046185.3-201ENST00000623228 1824 ntBASIC20.9■□□□□ 0.94
MBD4O95243 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC20.9■□□□□ 0.94
MBD4O95243 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
MBD4O95243 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC20.9■□□□□ 0.94
MBD4O95243 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 AL022342.1-201ENST00000400363 863 ntBASIC20.9■□□□□ 0.94
MBD4O95243 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.9■□□□□ 0.94
MBD4O95243 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.9■□□□□ 0.94
MBD4O95243 AC092910.1-201ENST00000482027 1129 ntBASIC20.9■□□□□ 0.94
MBD4O95243 SLC25A1P1-201ENST00000528351 927 ntBASIC20.9■□□□□ 0.94
MBD4O95243 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MBD4O95243 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.9■□□□□ 0.94
MBD4O95243 BX640515.1-201ENST00000617215 977 ntBASIC20.9■□□□□ 0.94
MBD4O95243 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.9■□□□□ 0.94
MBD4O95243 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MBD4O95243 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MBD4O95243 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.9■□□□□ 0.94
MBD4O95243 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
MBD4O95243 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
MBD4O95243 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.89■□□□□ 0.94
MBD4O95243 LYSMD4-203ENST00000378904 2122 ntBASIC20.89■□□□□ 0.94
MBD4O95243 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MBD4O95243 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
MBD4O95243 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
MBD4O95243 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MBD4O95243 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.89■□□□□ 0.93
MBD4O95243 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
MBD4O95243 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MBD4O95243 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.89■□□□□ 0.93
MBD4O95243 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.89■□□□□ 0.93
MBD4O95243 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms