Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.99□□□□□ -0.01
SSNA1O43805 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 KRT8P50-201ENST00000562022 1438 ntBASIC14.99□□□□□ -0.01
SSNA1O43805 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
SSNA1O43805 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SSNA1O43805 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.98□□□□□ -0.01
SSNA1O43805 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 DBET-201ENST00000630918 3363 ntBASIC14.98□□□□□ -0.01
SSNA1O43805 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.98□□□□□ -0.01
SSNA1O43805 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC14.98□□□□□ -0.01
SSNA1O43805 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SSNA1O43805 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SSNA1O43805 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SSNA1O43805 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.98□□□□□ -0.01
SSNA1O43805 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.98□□□□□ -0.01
SSNA1O43805 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC14.98□□□□□ -0.01
SSNA1O43805 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC14.98□□□□□ -0.01
SSNA1O43805 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC14.98□□□□□ -0.01
SSNA1O43805 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.98□□□□□ -0.01
SSNA1O43805 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.98□□□□□ -0.01
SSNA1O43805 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SSNA1O43805 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.98□□□□□ -0.01
SSNA1O43805 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
SSNA1O43805 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SSNA1O43805 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC14.98□□□□□ -0.01
SSNA1O43805 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC14.97□□□□□ -0.01
SSNA1O43805 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC14.97□□□□□ -0.01
SSNA1O43805 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSNA1O43805 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC14.97□□□□□ -0.01
SSNA1O43805 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.97□□□□□ -0.01
SSNA1O43805 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSNA1O43805 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.97□□□□□ -0.01
SSNA1O43805 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.97□□□□□ -0.01
SSNA1O43805 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.97□□□□□ -0.01
SSNA1O43805 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SSNA1O43805 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
SSNA1O43805 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
SSNA1O43805 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
SSNA1O43805 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms