Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
UPK1AO00322 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.66■□□□□ 0.26
UPK1AO00322 AC005332.1-201ENST00000577698 1310 ntBASIC16.66■□□□□ 0.26
UPK1AO00322 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.66■□□□□ 0.26
UPK1AO00322 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
UPK1AO00322 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1AO00322 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1AO00322 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK1AO00322 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.65■□□□□ 0.26
UPK1AO00322 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.65■□□□□ 0.26
UPK1AO00322 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK1AO00322 DDX43P3-201ENST00000441064 443 ntBASIC16.65■□□□□ 0.26
UPK1AO00322 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPK1AO00322 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1AO00322 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1AO00322 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1AO00322 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.65■□□□□ 0.26
UPK1AO00322 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1AO00322 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.65■□□□□ 0.26
UPK1AO00322 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
UPK1AO00322 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.65■□□□□ 0.26
UPK1AO00322 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.65■□□□□ 0.26
UPK1AO00322 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
UPK1AO00322 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 PCDHA14-201ENST00000506751 2298 ntBASIC16.65■□□□□ 0.26
UPK1AO00322 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
UPK1AO00322 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.26
UPK1AO00322 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
UPK1AO00322 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.64■□□□□ 0.26
UPK1AO00322 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK1AO00322 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK1AO00322 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
UPK1AO00322 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
UPK1AO00322 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.64■□□□□ 0.25
UPK1AO00322 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK1AO00322 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK1AO00322 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.64■□□□□ 0.25
UPK1AO00322 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 GUSBP12-201ENST00000513727 720 ntBASIC16.64■□□□□ 0.25
UPK1AO00322 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 REXO1L11P-201ENST00000620964 1927 ntBASIC16.64■□□□□ 0.25
UPK1AO00322 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
UPK1AO00322 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
UPK1AO00322 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
UPK1AO00322 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1AO00322 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1AO00322 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.63■□□□□ 0.25
UPK1AO00322 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1AO00322 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1AO00322 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1AO00322 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1AO00322 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
UPK1AO00322 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms