Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 AC091304.2-201ENST00000564639 760 ntBASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 BNIP3P18-201ENST00000593976 575 ntBASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 AL121772.3-201ENST00000610840 674 ntBASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RPH3AQ9Y2J0 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 AC125634.1-201ENST00000438758 1403 ntBASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.16■□□□□ 0.18
RPH3AQ9Y2J0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 KRT18P55-202ENST00000578578 1546 ntBASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 KRT18P31-201ENST00000506277 1292 ntBASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 AL138831.2-201ENST00000606564 490 ntBASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 TP73-AS1-210ENST00000637775 1455 ntBASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RPH3AQ9Y2J0 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.14■□□□□ 0.18
RPH3AQ9Y2J0 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RPH3AQ9Y2J0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 PCDHB18P-201ENST00000524813 2368 ntBASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 AC068880.1-201ENST00000507289 2297 ntBASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 RCN1P2-201ENST00000398357 915 ntBASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
RPH3AQ9Y2J0 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms