Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.8■□□□□ 0.76
COL20A1Q9P218 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 AL139327.4-201ENST00000612362 153 ntBASIC19.8■□□□□ 0.76
COL20A1Q9P218 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 AC004790.2-201ENST00000623588 572 ntBASIC19.8■□□□□ 0.76
COL20A1Q9P218 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.8■□□□□ 0.76
COL20A1Q9P218 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
COL20A1Q9P218 GPR89P-201ENST00000407924 1495 ntBASIC19.79■□□□□ 0.76
COL20A1Q9P218 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL20A1Q9P218 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL20A1Q9P218 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COL20A1Q9P218 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 LINC01451-201ENST00000623792 534 ntBASIC19.79■□□□□ 0.76
COL20A1Q9P218 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL20A1Q9P218 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL20A1Q9P218 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COL20A1Q9P218 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
COL20A1Q9P218 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL20A1Q9P218 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 AL355312.1-201ENST00000407115 2176 ntBASIC19.78■□□□□ 0.76
COL20A1Q9P218 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 AC023274.1-201ENST00000418278 595 ntBASIC19.78■□□□□ 0.76
COL20A1Q9P218 RNA5SP416-201ENST00000516838 111 ntBASIC19.78■□□□□ 0.76
COL20A1Q9P218 OR7E47P-204ENST00000575924 449 ntBASIC19.78■□□□□ 0.76
COL20A1Q9P218 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL20A1Q9P218 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL20A1Q9P218 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.78■□□□□ 0.76
COL20A1Q9P218 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL20A1Q9P218 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COL20A1Q9P218 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL20A1Q9P218 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL20A1Q9P218 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
COL20A1Q9P218 AL590787.1-201ENST00000568856 1315 ntBASIC19.77■□□□□ 0.76
COL20A1Q9P218 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 ACTG1P4-201ENST00000425123 1122 ntBASIC19.77■□□□□ 0.76
COL20A1Q9P218 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COL20A1Q9P218 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.77■□□□□ 0.76
COL20A1Q9P218 AC008764.6-201ENST00000595909 2069 ntBASIC19.77■□□□□ 0.75
COL20A1Q9P218 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.75
COL20A1Q9P218 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
COL20A1Q9P218 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms