Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.81■□□□□ 0.92
RTN4Q9NQC3 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 AC098799.1-201ENST00000504752 800 ntBASIC20.8■□□□□ 0.92
RTN4Q9NQC3 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.8■□□□□ 0.92
RTN4Q9NQC3 HLA-A-209ENST00000638375 975 ntBASIC20.8■□□□□ 0.92
RTN4Q9NQC3 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RTN4Q9NQC3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 AL160286.2-201ENST00000567150 934 ntBASIC20.79■□□□□ 0.92
RTN4Q9NQC3 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RTN4Q9NQC3 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 AC093677.2-201ENST00000600169 1863 ntBASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 CICP14-201ENST00000629111 2732 ntBASIC20.78■□□□□ 0.92
RTN4Q9NQC3 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RTN4Q9NQC3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms