Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 AC096633.1-201ENST00000422446 749 ntBASIC15.4■□□□□ 0.06
CDH20Q9HBT6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 KRT18P56-201ENST00000507275 550 ntBASIC15.4■□□□□ 0.06
CDH20Q9HBT6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 AC138894.3-201ENST00000603787 634 ntBASIC15.4■□□□□ 0.06
CDH20Q9HBT6 AL138831.2-201ENST00000606564 490 ntBASIC15.4■□□□□ 0.06
CDH20Q9HBT6 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CDH20Q9HBT6 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 NOC2LP2-201ENST00000407594 1944 ntBASIC15.39■□□□□ 0.05
CDH20Q9HBT6 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 NUS1P2-201ENST00000417358 873 ntBASIC15.39■□□□□ 0.05
CDH20Q9HBT6 IGHV3-47-201ENST00000425060 335 ntBASIC15.39■□□□□ 0.05
CDH20Q9HBT6 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 PRR29-207ENST00000580752 458 ntTSL 3 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 GATB-213ENST00000515812 1893 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 AC008764.6-201ENST00000595909 2069 ntBASIC15.39■□□□□ 0.05
CDH20Q9HBT6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CDH20Q9HBT6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 FAM220CP-201ENST00000395253 831 ntBASIC15.38■□□□□ 0.05
CDH20Q9HBT6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 POM121L3P-201ENST00000419331 1163 ntBASIC15.38■□□□□ 0.05
CDH20Q9HBT6 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CDH20Q9HBT6 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms