Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
CYSTM1Q9H1C7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 PHGDH-209ENST00000641074 1780 ntBASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 AC116351.2-201ENST00000606540 1585 ntBASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 MTHFR-217ENST00000641820 1569 ntBASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CYSTM1Q9H1C7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 GPAT2P1-201ENST00000444924 1672 ntBASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 NFYC-AS1-201ENST00000606277 1687 ntBASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CYSTM1Q9H1C7 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms