Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
TRIM47Q96LD4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 ALG1L5P-201ENST00000482043 771 ntBASIC20.54■□□□□ 0.88
TRIM47Q96LD4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 MIR4469-201ENST00000583919 79 ntBASIC20.54■□□□□ 0.88
TRIM47Q96LD4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 AL133373.2-201ENST00000623187 2828 ntBASIC20.54■□□□□ 0.88
TRIM47Q96LD4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRIM47Q96LD4 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 AC073621.1-201ENST00000392730 636 ntBASIC20.53■□□□□ 0.88
TRIM47Q96LD4 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 AC108751.1-201ENST00000490852 363 ntBASIC20.53■□□□□ 0.88
TRIM47Q96LD4 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 AC092364.2-202ENST00000597012 1073 ntBASIC20.53■□□□□ 0.88
TRIM47Q96LD4 MIR1199-201ENST00000621445 119 ntBASIC20.53■□□□□ 0.88
TRIM47Q96LD4 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
TRIM47Q96LD4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 KRT18P65-201ENST00000439811 1286 ntBASIC20.52■□□□□ 0.88
TRIM47Q96LD4 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.52■□□□□ 0.88
TRIM47Q96LD4 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 AC005593.1-201ENST00000624894 515 ntBASIC20.52■□□□□ 0.88
TRIM47Q96LD4 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRIM47Q96LD4 AC079776.2-201ENST00000641154 1609 ntBASIC20.52■□□□□ 0.88
TRIM47Q96LD4 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
TRIM47Q96LD4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRIM47Q96LD4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.52■□□□□ 0.87
TRIM47Q96LD4 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.51■□□□□ 0.87
TRIM47Q96LD4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM47Q96LD4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.51■□□□□ 0.87
TRIM47Q96LD4 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM47Q96LD4 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.51■□□□□ 0.87
TRIM47Q96LD4 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms