Protein–RNA interactions for Protein: Q92995

USP13, Ubiquitin carboxyl-terminal hydrolase 13, humanhuman

Predicted RBP Predictions only

Length 863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP13Q92995 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
USP13Q92995 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USP13Q92995 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.41■□□□□ 0.54
USP13Q92995 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP13Q92995 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP13Q92995 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC18.41■□□□□ 0.54
USP13Q92995 BX005266.1-201ENST00000473402 457 ntBASIC18.41■□□□□ 0.54
USP13Q92995 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.41■□□□□ 0.54
USP13Q92995 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.41■□□□□ 0.54
USP13Q92995 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP13Q92995 TERC-201ENST00000602385 541 ntBASIC18.41■□□□□ 0.54
USP13Q92995 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.41■□□□□ 0.54
USP13Q92995 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.41■□□□□ 0.54
USP13Q92995 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
USP13Q92995 AC107918.4-202ENST00000641623 219 ntBASIC18.41■□□□□ 0.54
USP13Q92995 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP13Q92995 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
USP13Q92995 PMS2P7-201ENST00000506558 1336 ntBASIC18.41■□□□□ 0.54
USP13Q92995 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP13Q92995 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.41■□□□□ 0.54
USP13Q92995 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP13Q92995 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
USP13Q92995 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
USP13Q92995 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.4■□□□□ 0.54
USP13Q92995 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
USP13Q92995 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.4■□□□□ 0.54
USP13Q92995 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
USP13Q92995 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.4■□□□□ 0.54
USP13Q92995 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
USP13Q92995 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.4■□□□□ 0.54
USP13Q92995 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC18.4■□□□□ 0.54
USP13Q92995 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.4■□□□□ 0.54
USP13Q92995 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC18.4■□□□□ 0.54
USP13Q92995 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.4■□□□□ 0.54
USP13Q92995 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.4■□□□□ 0.54
USP13Q92995 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.4■□□□□ 0.54
USP13Q92995 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.4■□□□□ 0.54
USP13Q92995 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.4■□□□□ 0.54
USP13Q92995 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
USP13Q92995 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC18.4■□□□□ 0.54
USP13Q92995 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
USP13Q92995 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.4■□□□□ 0.54
USP13Q92995 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
USP13Q92995 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP13Q92995 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
USP13Q92995 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
USP13Q92995 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.39■□□□□ 0.53
USP13Q92995 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 AL096828.2-201ENST00000567259 1965 ntBASIC18.39■□□□□ 0.53
USP13Q92995 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP13Q92995 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP13Q92995 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
USP13Q92995 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
USP13Q92995 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.39■□□□□ 0.53
USP13Q92995 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.39■□□□□ 0.53
USP13Q92995 KRT18P13-201ENST00000400056 1290 ntBASIC18.39■□□□□ 0.53
USP13Q92995 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.39■□□□□ 0.53
USP13Q92995 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.39■□□□□ 0.53
USP13Q92995 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.39■□□□□ 0.53
USP13Q92995 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.39■□□□□ 0.53
USP13Q92995 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
USP13Q92995 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
USP13Q92995 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.39■□□□□ 0.53
USP13Q92995 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.39■□□□□ 0.53
USP13Q92995 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
USP13Q92995 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms