Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
MBD3L1Q8WWY6 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
MBD3L1Q8WWY6 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 AC005052.1-201ENST00000625181 2492 ntBASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 KSR1P1-201ENST00000446298 240 ntBASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 AC083906.2-201ENST00000511578 360 ntBASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 AC026271.3-201ENST00000571884 352 ntBASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 MTDHP1-201ENST00000605323 784 ntBASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 AC132872.4-202ENST00000622924 2756 ntBASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.8□□□□□ -0.2
MBD3L1Q8WWY6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms