Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 SIRPAP1-201ENST00000448467 1770 ntBASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 MYCLP1-201ENST00000372451 1075 ntBASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 IGHV3-52-201ENST00000519770 353 ntBASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 MIR5100-201ENST00000579544 119 ntBASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 AL591684.3-201ENST00000605187 298 ntBASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCDC148Q8NFR7 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC148Q8NFR7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.27■□□□□ 0.83
CCDC148Q8NFR7 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC148Q8NFR7 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CCDC148Q8NFR7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 TSPY19P-201ENST00000418461 509 ntBASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 TSPY18P-201ENST00000441642 509 ntBASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC148Q8NFR7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 KRT18P31-201ENST00000506277 1292 ntBASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 AC109462.3-201ENST00000573934 613 ntBASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 AC012313.10-201ENST00000623509 926 ntBASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 AL049757.1-201ENST00000616842 1596 ntBASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC148Q8NFR7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC20.24■□□□□ 0.83
CCDC148Q8NFR7 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms