Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 BCAR1-209ENST00000546196 1340 ntBASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NPAS3Q8IXF0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 AL031432.2-201ENST00000566714 459 ntBASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 AL928711.1-201ENST00000570165 459 ntBASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 GGTLC5P-201ENST00000617623 998 ntBASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 AC135776.1-201ENST00000319817 2481 ntBASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.12■□□□□ 0.49
NPAS3Q8IXF0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 RHOQP3-201ENST00000437982 621 ntBASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 AC002558.1-201ENST00000488906 803 ntBASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 AP002472.1-201ENST00000577490 586 ntBASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS3Q8IXF0 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 WIZP1-201ENST00000531444 2299 ntBASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS3Q8IXF0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
NPAS3Q8IXF0 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS3Q8IXF0 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
NPAS3Q8IXF0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS3Q8IXF0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms