Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00575Q6W349 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC00575Q6W349 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC11.17□□□□□ -0.62
LINC00575Q6W349 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
LINC00575Q6W349 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
LINC00575Q6W349 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
LINC00575Q6W349 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC00575Q6W349 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00575Q6W349 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AC092068.3-201ENST00000587894 2016 ntBASIC11.16□□□□□ -0.62
LINC00575Q6W349 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 DDX43P3-201ENST00000441064 443 ntBASIC11.16□□□□□ -0.62
LINC00575Q6W349 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AC009949.1-201ENST00000623048 1830 ntBASIC11.16□□□□□ -0.62
LINC00575Q6W349 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LINC00575Q6W349 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC11.16□□□□□ -0.62
LINC00575Q6W349 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LINC00575Q6W349 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
LINC00575Q6W349 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms