Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC62Q6P9F0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 AC010327.4-202ENST00000591484 748 ntBASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CCDC62Q6P9F0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 AC002558.1-201ENST00000488906 803 ntBASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 IGHV3-65-201ENST00000523210 341 ntBASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 AC090164.3-201ENST00000610780 2143 ntBASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 AC026471.1-201ENST00000564629 3026 ntBASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 KRT18P55-202ENST00000578578 1546 ntBASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCDC62Q6P9F0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 AC009336.1-201ENST00000608941 1553 ntBASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 AC023274.1-201ENST00000418278 595 ntBASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 STK19B-204ENST00000512515 211 ntBASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 IGHV3-52-201ENST00000519770 353 ntBASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 AC008667.4-201ENST00000607370 168 ntBASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.7■□□□□ 0.74
CCDC62Q6P9F0 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC62Q6P9F0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms