Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 MIR4785-201ENST00000585005 73 ntBASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 AL049637.2-201ENST00000641778 930 ntBASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 LINC00167-201ENST00000530583 1419 ntBASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC14.63□□□□□ -0.07
ANKRD55Q3KP44 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 MDFI-202ENST00000373050 809 ntTSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 CA15P1-201ENST00000481698 905 ntBASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 AC104390.1-201ENST00000555663 520 ntBASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 SLC25A1P4-201ENST00000567977 778 ntBASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 MIR3180-4-201ENST00000582223 153 ntBASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ANKRD55Q3KP44 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 AC026691.1-201ENST00000602502 2017 ntBASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 PCDHB17P-201ENST00000539533 2393 ntBASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ANKRD55Q3KP44 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms