Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRPFP62306 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRPFP62306 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRPFP62306 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRPFP62306 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRPFP62306 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRPFP62306 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRPFP62306 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
SNRPFP62306 AC116353.5-201ENST00000638148 1699 ntBASIC19.08■□□□□ 0.64
SNRPFP62306 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
SNRPFP62306 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SNRPFP62306 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRPFP62306 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRPFP62306 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRPFP62306 CROCCP2-202ENST00000412962 2773 ntBASIC19.07■□□□□ 0.64
SNRPFP62306 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SNRPFP62306 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.07■□□□□ 0.64
SNRPFP62306 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRPFP62306 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC19.07■□□□□ 0.64
SNRPFP62306 SDHD-206ENST00000528182 754 ntTSL 3 BASIC19.07■□□□□ 0.64
SNRPFP62306 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC19.07■□□□□ 0.64
SNRPFP62306 CLEC4GP1-201ENST00000596555 870 ntBASIC19.07■□□□□ 0.64
SNRPFP62306 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.07■□□□□ 0.64
SNRPFP62306 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
SNRPFP62306 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRPFP62306 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.06■□□□□ 0.64
SNRPFP62306 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
SNRPFP62306 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.06■□□□□ 0.64
SNRPFP62306 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.06■□□□□ 0.64
SNRPFP62306 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 AP001269.4-201ENST00000609611 512 ntBASIC19.06■□□□□ 0.64
SNRPFP62306 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.06■□□□□ 0.64
SNRPFP62306 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRPFP62306 PP12613-201ENST00000424958 2230 ntBASIC19.06■□□□□ 0.64
SNRPFP62306 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SNRPFP62306 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC19.06■□□□□ 0.64
SNRPFP62306 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
SNRPFP62306 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SNRPFP62306 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNRPFP62306 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SNRPFP62306 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRPFP62306 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.05■□□□□ 0.64
SNRPFP62306 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRPFP62306 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.05■□□□□ 0.64
SNRPFP62306 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
SNRPFP62306 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
SNRPFP62306 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SNRPFP62306 AC141586.5-201ENST00000624546 2050 ntBASIC19.05■□□□□ 0.64
SNRPFP62306 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.05■□□□□ 0.64
SNRPFP62306 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
SNRPFP62306 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SNRPFP62306 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNRPFP62306 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRPFP62306 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SNRPFP62306 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.05■□□□□ 0.64
SNRPFP62306 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SNRPFP62306 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 HR-201ENST00000312841 5351 ntTSL 5 BASIC19.04■□□□□ 0.64
SNRPFP62306 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SNRPFP62306 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.04■□□□□ 0.64
SNRPFP62306 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SNRPFP62306 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.04■□□□□ 0.64
SNRPFP62306 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms