Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN12P56749 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN12P56749 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN12P56749 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN12P56749 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.32■□□□□ 0.04
CLDN12P56749 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.32■□□□□ 0.04
CLDN12P56749 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN12P56749 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN12P56749 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CLDN12P56749 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN12P56749 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CLDN12P56749 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC15.32■□□□□ 0.04
CLDN12P56749 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.31■□□□□ 0.04
CLDN12P56749 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 SLC25A1P2-201ENST00000430693 912 ntBASIC15.31■□□□□ 0.04
CLDN12P56749 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN12P56749 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 AP005242.2-201ENST00000580065 1175 ntBASIC15.31■□□□□ 0.04
CLDN12P56749 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.31■□□□□ 0.04
CLDN12P56749 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLDN12P56749 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
CLDN12P56749 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 LYSMD4-203ENST00000378904 2122 ntBASIC15.31■□□□□ 0.04
CLDN12P56749 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CLDN12P56749 WT1-209ENST00000530998 2421 ntTSL 2 BASIC15.31■□□□□ 0.04
CLDN12P56749 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CLDN12P56749 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN12P56749 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
CLDN12P56749 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN12P56749 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN12P56749 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CLDN12P56749 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.3■□□□□ 0.04
CLDN12P56749 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.3■□□□□ 0.04
CLDN12P56749 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 KRT18P29-201ENST00000397031 1267 ntBASIC15.3■□□□□ 0.04
CLDN12P56749 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
CLDN12P56749 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CLDN12P56749 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN12P56749 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.3■□□□□ 0.04
CLDN12P56749 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CLDN12P56749 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms