Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.4■□□□□ 0.22
SOX30O94993 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.4■□□□□ 0.22
SOX30O94993 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 IGHV3-52-201ENST00000519770 353 ntBASIC16.4■□□□□ 0.22
SOX30O94993 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SOX30O94993 AL138831.2-201ENST00000606564 490 ntBASIC16.4■□□□□ 0.22
SOX30O94993 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.4■□□□□ 0.22
SOX30O94993 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SOX30O94993 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.4■□□□□ 0.22
SOX30O94993 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
SOX30O94993 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
SOX30O94993 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
SOX30O94993 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
SOX30O94993 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SOX30O94993 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SOX30O94993 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX30O94993 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 FAM220CP-201ENST00000395253 831 ntBASIC16.39■□□□□ 0.21
SOX30O94993 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.39■□□□□ 0.21
SOX30O94993 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.39■□□□□ 0.21
SOX30O94993 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SOX30O94993 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SOX30O94993 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
SOX30O94993 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.39■□□□□ 0.21
SOX30O94993 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.39■□□□□ 0.21
SOX30O94993 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.39■□□□□ 0.21
SOX30O94993 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SOX30O94993 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX30O94993 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.38■□□□□ 0.21
SOX30O94993 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
SOX30O94993 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.38■□□□□ 0.21
SOX30O94993 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
SOX30O94993 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SOX30O94993 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX30O94993 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.38■□□□□ 0.21
SOX30O94993 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.38■□□□□ 0.21
SOX30O94993 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX30O94993 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX30O94993 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.38■□□□□ 0.21
SOX30O94993 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX30O94993 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
SOX30O94993 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.38■□□□□ 0.21
SOX30O94993 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SOX30O94993 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX30O94993 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX30O94993 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.38■□□□□ 0.21
SOX30O94993 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SOX30O94993 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.37■□□□□ 0.21
SOX30O94993 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.37■□□□□ 0.21
SOX30O94993 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.37■□□□□ 0.21
SOX30O94993 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.37■□□□□ 0.21
SOX30O94993 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.37■□□□□ 0.21
SOX30O94993 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SOX30O94993 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms