Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 LBH-203ENST00000404397 543 ntTSL 4 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 KRT19P2-202ENST00000557173 1012 ntBASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 AC027796.2-201ENST00000575326 344 ntBASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 ELL2P1-201ENST00000413990 1906 ntBASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 BCAR1-209ENST00000546196 1340 ntBASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LEMD3Q9Y2U8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 SNHG9-202ENST00000564014 471 ntBASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 AL078644.1-201ENST00000609881 752 ntBASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 AC007064.4-201ENST00000637740 555 ntBASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 AC138028.4-201ENST00000564984 1845 ntBASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.24■□□□□ 0.99
LEMD3Q9Y2U8 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 CD82-202ENST00000342935 967 ntTSL 5 BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 REXO1L11P-201ENST00000620964 1927 ntBASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 KRT18P28-201ENST00000453838 1332 ntBASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LEMD3Q9Y2U8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC025580.3-201ENST00000617932 1424 ntBASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 HLA-DQB1-201ENST00000374943 1656 ntBASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AL135999.2-201ENST00000622438 1686 ntBASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC074386.1-202ENST00000463561 864 ntBASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC21.22■□□□□ 0.99
LEMD3Q9Y2U8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.22■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms