Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
SPG7Q9UQ90 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 AL031432.2-201ENST00000566714 459 ntBASIC22.87■■□□□ 1.25
SPG7Q9UQ90 AL928711.1-201ENST00000570165 459 ntBASIC22.87■■□□□ 1.25
SPG7Q9UQ90 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
SPG7Q9UQ90 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 PI4KAP1-204ENST00000612579 1703 ntBASIC22.86■■□□□ 1.25
SPG7Q9UQ90 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 AC025580.3-201ENST00000617932 1424 ntBASIC22.86■■□□□ 1.25
SPG7Q9UQ90 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 PON3-203ENST00000427422 894 ntTSL 3 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 AC074386.1-202ENST00000463561 864 ntBASIC22.86■■□□□ 1.25
SPG7Q9UQ90 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 AC007064.4-201ENST00000637740 555 ntBASIC22.86■■□□□ 1.25
SPG7Q9UQ90 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC22.86■■□□□ 1.25
SPG7Q9UQ90 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 RFPL4AP1-201ENST00000530883 850 ntBASIC22.85■■□□□ 1.25
SPG7Q9UQ90 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 AC023141.13-201ENST00000604991 943 ntBASIC22.85■■□□□ 1.25
SPG7Q9UQ90 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 KRT18P55-202ENST00000578578 1546 ntBASIC22.85■■□□□ 1.25
SPG7Q9UQ90 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
SPG7Q9UQ90 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 AL590787.1-201ENST00000568856 1315 ntBASIC22.84■■□□□ 1.25
SPG7Q9UQ90 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 STK4-201ENST00000372801 2038 ntTSL 2 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 PUS1-205ENST00000535067 838 ntTSL 3 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 CCND1-203ENST00000536559 553 ntTSL 3 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 AP002472.1-201ENST00000577490 586 ntBASIC22.84■■□□□ 1.25
SPG7Q9UQ90 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC22.84■■□□□ 1.25
SPG7Q9UQ90 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms