Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 REXO1L11P-201ENST00000620964 1927 ntBASIC18.21■□□□□ 0.51
RNF38Q9H0F5 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 AC135050.7-201ENST00000624508 2218 ntBASIC18.21■□□□□ 0.51
RNF38Q9H0F5 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 AL354751.1-201ENST00000412768 1863 ntBASIC18.21■□□□□ 0.51
RNF38Q9H0F5 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 AC006557.2-201ENST00000592985 1240 ntBASIC18.21■□□□□ 0.51
RNF38Q9H0F5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
RNF38Q9H0F5 PMS2P7-201ENST00000506558 1336 ntBASIC18.21■□□□□ 0.51
RNF38Q9H0F5 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 AC009947.1-201ENST00000444350 727 ntBASIC18.2■□□□□ 0.5
RNF38Q9H0F5 AC002558.1-201ENST00000488906 803 ntBASIC18.2■□□□□ 0.5
RNF38Q9H0F5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 AC140113.2-201ENST00000604370 208 ntBASIC18.2■□□□□ 0.5
RNF38Q9H0F5 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 AC006504.4-201ENST00000592118 1568 ntBASIC18.2■□□□□ 0.5
RNF38Q9H0F5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.2■□□□□ 0.5
RNF38Q9H0F5 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 PGAM5P1-201ENST00000518923 814 ntBASIC18.19■□□□□ 0.5
RNF38Q9H0F5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 AC009336.1-201ENST00000608941 1553 ntBASIC18.19■□□□□ 0.5
RNF38Q9H0F5 AC027601.4-201ENST00000611259 610 ntBASIC18.19■□□□□ 0.5
RNF38Q9H0F5 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.19■□□□□ 0.5
RNF38Q9H0F5 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RNF38Q9H0F5 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms