Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 AC005104.2-201ENST00000427818 678 ntBASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 AC132008.2-207ENST00000454517 770 ntBASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 AC019129.2-201ENST00000609837 1235 ntBASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.52■□□□□ 0.56
SCUBE3Q8IX30 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC18.52■□□□□ 0.55
SCUBE3Q8IX30 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCUBE3Q8IX30 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SCUBE3Q8IX30 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SCUBE3Q8IX30 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 UNC93B7-201ENST00000509439 705 ntBASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SCUBE3Q8IX30 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 AD001527.2-201ENST00000622994 785 ntBASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SCUBE3Q8IX30 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms