Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EPHB4P54760 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
EPHB4P54760 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.79■□□□□ 0.76
EPHB4P54760 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EPHB4P54760 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 AC099343.3-201ENST00000605834 2503 ntBASIC19.78■□□□□ 0.76
EPHB4P54760 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EPHB4P54760 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.78■□□□□ 0.76
EPHB4P54760 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.78■□□□□ 0.76
EPHB4P54760 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
EPHB4P54760 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
EPHB4P54760 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.78■□□□□ 0.76
EPHB4P54760 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC19.78■□□□□ 0.76
EPHB4P54760 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.78■□□□□ 0.76
EPHB4P54760 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.78■□□□□ 0.76
EPHB4P54760 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC19.78■□□□□ 0.76
EPHB4P54760 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.78■□□□□ 0.76
EPHB4P54760 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
EPHB4P54760 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
EPHB4P54760 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.78■□□□□ 0.76
EPHB4P54760 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.78■□□□□ 0.76
EPHB4P54760 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.78■□□□□ 0.76
EPHB4P54760 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
EPHB4P54760 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EPHB4P54760 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.78■□□□□ 0.76
EPHB4P54760 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.78■□□□□ 0.76
EPHB4P54760 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
EPHB4P54760 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EPHB4P54760 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.77■□□□□ 0.76
EPHB4P54760 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
EPHB4P54760 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
EPHB4P54760 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.77■□□□□ 0.76
EPHB4P54760 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.77■□□□□ 0.76
EPHB4P54760 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.77■□□□□ 0.76
EPHB4P54760 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.77■□□□□ 0.76
EPHB4P54760 CALY-203ENST00000368558 825 ntTSL 5 BASIC19.77■□□□□ 0.76
EPHB4P54760 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.77■□□□□ 0.76
EPHB4P54760 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC19.77■□□□□ 0.76
EPHB4P54760 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.77■□□□□ 0.76
EPHB4P54760 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.77■□□□□ 0.76
EPHB4P54760 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC19.77■□□□□ 0.76
EPHB4P54760 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.77■□□□□ 0.76
EPHB4P54760 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC19.77■□□□□ 0.76
EPHB4P54760 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC19.77■□□□□ 0.76
EPHB4P54760 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EPHB4P54760 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.77■□□□□ 0.75
EPHB4P54760 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
EPHB4P54760 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
EPHB4P54760 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.77■□□□□ 0.75
EPHB4P54760 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB4P54760 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
EPHB4P54760 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.76■□□□□ 0.75
EPHB4P54760 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB4P54760 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB4P54760 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB4P54760 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB4P54760 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB4P54760 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
EPHB4P54760 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
EPHB4P54760 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EPHB4P54760 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms