Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.98□□□□□ -0.17
PF4V1P10720 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.98□□□□□ -0.17
PF4V1P10720 AP005901.3-202ENST00000581653 237 ntBASIC13.98□□□□□ -0.17
PF4V1P10720 AC104692.2-201ENST00000603054 253 ntBASIC13.98□□□□□ -0.17
PF4V1P10720 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 AC116407.2-201ENST00000613639 860 ntBASIC13.98□□□□□ -0.17
PF4V1P10720 REXO1L6P-202ENST00000619970 1078 ntBASIC13.98□□□□□ -0.17
PF4V1P10720 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PF4V1P10720 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC13.98□□□□□ -0.17
PF4V1P10720 AC138028.4-201ENST00000564984 1845 ntBASIC13.98□□□□□ -0.17
PF4V1P10720 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
PF4V1P10720 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC13.98□□□□□ -0.17
PF4V1P10720 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC13.98□□□□□ -0.17
PF4V1P10720 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
PF4V1P10720 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC13.98□□□□□ -0.17
PF4V1P10720 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
PF4V1P10720 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
PF4V1P10720 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
PF4V1P10720 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 AL354751.1-201ENST00000412768 1863 ntBASIC13.97□□□□□ -0.17
PF4V1P10720 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC13.97□□□□□ -0.17
PF4V1P10720 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.97□□□□□ -0.17
PF4V1P10720 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC13.97□□□□□ -0.17
PF4V1P10720 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC13.97□□□□□ -0.17
PF4V1P10720 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 AL390961.4-201ENST00000623958 2535 ntBASIC13.97□□□□□ -0.17
PF4V1P10720 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
PF4V1P10720 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC13.97□□□□□ -0.17
PF4V1P10720 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 AC091607.1-201ENST00000490318 1060 ntBASIC13.97□□□□□ -0.17
PF4V1P10720 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.97□□□□□ -0.17
PF4V1P10720 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.97□□□□□ -0.17
PF4V1P10720 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13.97□□□□□ -0.17
PF4V1P10720 MNT-208ENST00000575394 606 ntTSL 4 BASIC13.97□□□□□ -0.17
PF4V1P10720 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC13.97□□□□□ -0.17
PF4V1P10720 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
PF4V1P10720 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
PF4V1P10720 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
PF4V1P10720 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC13.96□□□□□ -0.17
PF4V1P10720 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
PF4V1P10720 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
PF4V1P10720 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC13.96□□□□□ -0.17
PF4V1P10720 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
PF4V1P10720 TBC1D3P5-201ENST00000579401 1545 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms