Protein–RNA interactions for Protein: O95833

CLIC3, Chloride intracellular channel protein 3, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3O95833 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC3O95833 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC3O95833 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC3O95833 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC3O95833 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLIC3O95833 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
CLIC3O95833 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC3O95833 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC3O95833 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
CLIC3O95833 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC3O95833 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 AC078925.2-201ENST00000624013 1973 ntBASIC16.3■□□□□ 0.2
CLIC3O95833 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.3■□□□□ 0.2
CLIC3O95833 AP002982.1-201ENST00000492365 877 ntBASIC16.3■□□□□ 0.2
CLIC3O95833 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.3■□□□□ 0.2
CLIC3O95833 MIR4674-201ENST00000582457 87 ntBASIC16.3■□□□□ 0.2
CLIC3O95833 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
CLIC3O95833 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC3O95833 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC3O95833 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLIC3O95833 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.3■□□□□ 0.2
CLIC3O95833 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.3■□□□□ 0.2
CLIC3O95833 AC092068.3-201ENST00000587894 2016 ntBASIC16.29■□□□□ 0.2
CLIC3O95833 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLIC3O95833 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
CLIC3O95833 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC3O95833 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLIC3O95833 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIC3O95833 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLIC3O95833 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 AC092850.2-201ENST00000623821 2697 ntBASIC16.29■□□□□ 0.2
CLIC3O95833 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC3O95833 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.29■□□□□ 0.2
CLIC3O95833 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC16.29■□□□□ 0.2
CLIC3O95833 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.29■□□□□ 0.2
CLIC3O95833 KRT18P23-201ENST00000435622 1283 ntBASIC16.29■□□□□ 0.2
CLIC3O95833 KSR1P1-201ENST00000446298 240 ntBASIC16.29■□□□□ 0.2
CLIC3O95833 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.29■□□□□ 0.2
CLIC3O95833 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CLIC3O95833 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
CLIC3O95833 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.29■□□□□ 0.2
CLIC3O95833 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLIC3O95833 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 HOXB1-202ENST00000577092 1414 ntBASIC16.28■□□□□ 0.2
CLIC3O95833 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CLIC3O95833 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.28■□□□□ 0.2
CLIC3O95833 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.28■□□□□ 0.2
CLIC3O95833 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CLIC3O95833 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLIC3O95833 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms