Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.85■□□□□ 0.29
DUX1O43812 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DUX1O43812 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
DUX1O43812 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.85■□□□□ 0.29
DUX1O43812 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DUX1O43812 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.84■□□□□ 0.29
DUX1O43812 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.84■□□□□ 0.29
DUX1O43812 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 AC007967.2-201ENST00000432613 625 ntBASIC16.84■□□□□ 0.29
DUX1O43812 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.84■□□□□ 0.29
DUX1O43812 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 AL139424.1-201ENST00000607572 797 ntBASIC16.84■□□□□ 0.29
DUX1O43812 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
DUX1O43812 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.84■□□□□ 0.29
DUX1O43812 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DUX1O43812 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.84■□□□□ 0.29
DUX1O43812 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
DUX1O43812 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.83■□□□□ 0.28
DUX1O43812 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
DUX1O43812 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.83■□□□□ 0.28
DUX1O43812 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.83■□□□□ 0.28
DUX1O43812 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.83■□□□□ 0.28
DUX1O43812 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.83■□□□□ 0.28
DUX1O43812 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.83■□□□□ 0.28
DUX1O43812 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.83■□□□□ 0.28
DUX1O43812 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
DUX1O43812 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
DUX1O43812 AC006504.4-201ENST00000592118 1568 ntBASIC16.83■□□□□ 0.28
DUX1O43812 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.83■□□□□ 0.28
DUX1O43812 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
DUX1O43812 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
DUX1O43812 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX1O43812 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
DUX1O43812 AC138028.4-201ENST00000564984 1845 ntBASIC16.82■□□□□ 0.28
DUX1O43812 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX1O43812 OR6D1P-202ENST00000641007 5290 ntBASIC16.82■□□□□ 0.28
DUX1O43812 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX1O43812 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
DUX1O43812 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
DUX1O43812 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
DUX1O43812 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.82■□□□□ 0.28
DUX1O43812 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.82■□□□□ 0.28
DUX1O43812 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX1O43812 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX1O43812 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX1O43812 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.82■□□□□ 0.28
DUX1O43812 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
DUX1O43812 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX1O43812 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.82■□□□□ 0.28
DUX1O43812 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
DUX1O43812 AC097637.2-201ENST00000624096 1997 ntBASIC16.82■□□□□ 0.28
DUX1O43812 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
DUX1O43812 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX1O43812 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
DUX1O43812 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX1O43812 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
DUX1O43812 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.81■□□□□ 0.28
DUX1O43812 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.81■□□□□ 0.28
DUX1O43812 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
DUX1O43812 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms