Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 NTF6G-201ENST00000591094 616 ntBASIC17.3■□□□□ 0.36
VGLL3A8MV65 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
VGLL3A8MV65 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC17.3■□□□□ 0.36
VGLL3A8MV65 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 AC092666.2-201ENST00000613287 246 ntBASIC17.29■□□□□ 0.36
VGLL3A8MV65 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 AC006058.4-201ENST00000624016 1670 ntBASIC17.29■□□□□ 0.36
VGLL3A8MV65 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
VGLL3A8MV65 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
VGLL3A8MV65 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
VGLL3A8MV65 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
VGLL3A8MV65 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.27■□□□□ 0.36
VGLL3A8MV65 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms