Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 AC005915.1-201ENST00000624912 2018 ntBASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MEIS3P1A6NDR6 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 AC097488.1-201ENST00000507834 756 ntBASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 AC009065.1-201ENST00000564055 1225 ntBASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 AC011270.2-201ENST00000624293 2550 ntBASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 AL162727.3-201ENST00000635661 2787 ntBASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
MEIS3P1A6NDR6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 AC006058.3-201ENST00000606217 1069 ntBASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 AC022898.2-201ENST00000616822 1312 ntBASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 PKD1P5-201ENST00000532415 10291 ntBASIC15.12■□□□□ 0.01
MEIS3P1A6NDR6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
MEIS3P1A6NDR6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms