Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RPH3AQ9Y2J0 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 NOC2LP2-201ENST00000407594 1944 ntBASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 NUS1P2-201ENST00000417358 873 ntBASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 IGHV3-47-201ENST00000425060 335 ntBASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 AC096582.2-201ENST00000510860 516 ntBASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 DUTP2-201ENST00000519164 463 ntBASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.21■□□□□ 0.19
RPH3AQ9Y2J0 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RPH3AQ9Y2J0 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
RPH3AQ9Y2J0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.21■□□□□ 0.18
RPH3AQ9Y2J0 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 AL353801.3-201ENST00000609898 542 ntBASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RPH3AQ9Y2J0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RPH3AQ9Y2J0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms